The detailed information of tRNA gene sequence


Sequence ID>SRA1005206
Genome IDSRR006907.102451
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 71
End posion on genome 144
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ggccccacca
tRNA gene sequence 
CGGGGATTAGCGCAGTTTGGTAGCGCATCTGCTTTGGGAGCAGAGGGCCGCAGGTTCAAA
TCCTGCATCTCCGAtta
Downstream region at tRNA end position 
tcagaattct
Secondary structure (Cloverleaf model)
>SRA1005206	Pro	TGG
                   a      Atta tcagaattct
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A          T A
                    T     C G T C C     A
      T G A        A      | | | | |     A
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGCC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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