The detailed information of tRNA gene sequence


Sequence ID>SRA1005207
Genome IDSRR006907.103463
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 158
End posion on genome 67
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcttagatgc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCCGAAGGCGGCGGTTTGCTAAACCGTTATACGGGTAACACCG
TATCGGAGGTTCGAATCCTCTCCTCTCCGCCA
Downstream region at tRNA end position 
tttacagttc
Secondary structure (Cloverleaf model)
>SRA1005207	Ser	GCT
                   c      GCCA tttacagttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T C T C C     A
      T G A        G      + | | | |     G
    G       G C C G       G G A G G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     TATACGGGTAACACCGTATC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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