The detailed information of tRNA gene sequence


Sequence ID>SRA1005211
Genome IDSRR006907.109650
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 122
End posion on genome 196
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tgacttactT
tRNA gene sequence 
GGGGAATTATCTCAGTTGGTAGAGCATCGCCTTTGCAAGGCGGGTGTCAGGAGTTCGAGT
CTCCTATTCTCCATaa
Downstream region at tRNA end position 
ataaaaataa
Secondary structure (Cloverleaf model)
>SRA1005211	Ala	TGC
                   T      ATaa ataaaaataa
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     A - T
                     T - A          T G
                    T     T C C T C     A
      T G A        A      | | | | |     G
    T       C T C T       A G G A G     C
    G       | | |                   T T
    G       G A G C
      T A          A     GTGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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