The detailed information of tRNA gene sequence


Sequence ID>SRA1005214
Genome IDSRR006907.111656
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 224
End posion on genome 151
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
atgattacca
tRNA gene sequence 
GGGGAATTAGCTCAGTCTGGTAGAGCACCTGCTTTGCAAGCAGGGAGTCAGGAGTTCGAG
TCTCCTATTCTCCAttc
Downstream region at tRNA end position 
gctattcgca
Secondary structure (Cloverleaf model)
>SRA1005214	Ala	TGC
                   a      Attc gctattcgca
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     A - T
                     T - A          T G
                    T     T C C T C     A
      T G A        A      | | | | |     G
    C       C T C G       A G G A G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GAGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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