The detailed information of tRNA gene sequence


Sequence ID>SRA1005221
Genome IDSRR006907.119706
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 199
End posion on genome 273
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ataacaaatt
tRNA gene sequence 
GCCCCCATAGTTAAAAGGATATAACAGGACTCTTCTAAAGTCTCATTCCTGGTTCGATTC
CGGGTGGGGGTACCA
Downstream region at tRNA end position 
aacctaaaaa
Secondary structure (Cloverleaf model)
>SRA1005221	Arg	TCT
                   t      ACCA aacctaaaaa
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     G G G C C     A
      A A A        A      | | + | |     G
    G       A T T G       C C T G G     C
    G       | | | |                 T T
    A       T A A C
      T A          A     CATT
                    G + T
                    G - C
                    A - T
                    C - G
                    T - A
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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