The detailed information of tRNA gene sequence


Sequence ID>SRA1005226
Genome IDSRR006907.122924
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 84
End posion on genome 10
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
ctgttttttt
tRNA gene sequence 
AGGCACGTAGCTCAGTGGTAGAGCACCACCTTGACATGGTGGTGGTCGGTGGTTCGATCC
CACTCGTGCCTACCA
Downstream region at tRNA end position 
ttttatgtcn
Secondary structure (Cloverleaf model)
>SRA1005226	Val	GAC
                   t      ACCA ttttatgtcn
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T
                     C - G
                     G - C          C T
                    T     T C A C C     A
        G A        A      + | | | |     G
      T     C T C G       G G T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     TGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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