The detailed information of tRNA gene sequence


Sequence ID>SRA1005230
Genome IDSRR006907.125131
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 183
End posion on genome 112
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aagcctgcaa
tRNA gene sequence 
GTAGCTGTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCCGGGTTCAATTC
CCGGCAGCTGCGaaa
Downstream region at tRNA end position 
cagcgattgt
Secondary structure (Cloverleaf model)
>SRA1005230	Asp	GTC
                   a      Gaaa cagcgattgt
                     G - C
                     T + G
                     A - T
                     G - C
                     C - G
                     T - A
                     G - C          T T
                    T     G G C C C     A
      T G A        A      | | | | |     A
    G       T A T G       C C G G G     C
    G       + | | +                 T T
    T       G T A T
      T A          C     AGAC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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