The detailed information of tRNA gene sequence


Sequence ID>SRA1005232
Genome IDSRR006907.125686
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 94
End posion on genome 20
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tgacttatac
tRNA gene sequence 
GCATCTATGGTGAAATTGGTATCATCACGGTCTCCAAAACCGTTGTTCTAGGTTCGAGTC
CTAGTGGATGTGCAA
Downstream region at tRNA end position 
ataaaatata
Secondary structure (Cloverleaf model)
>SRA1005232	Trp	CCA
                   c      GCAA ataaaatata
                     G + T
                     C - G
                     A - T
                     T - A
                     C - G
                     T + G
                     A - T          T G
                    T     G A T C C     A
      T A A        G      | | | | |     G
    T       A G T G       C T A G G     C
    G       | | | +                 T T
    G       T C A T
      T A          C     TGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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