The detailed information of tRNA gene sequence


Sequence ID>SRA1005234
Genome IDSRR006907.127447
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 94
End posion on genome 170
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
agaagaaatt
tRNA gene sequence 
GCGCCCGTAGCTCAACTGGATAGAGCATCTGACTTCGGATCAGAAGGTTTGGGGTTCGAA
TCCCTACGGGCGCACTA
Downstream region at tRNA end position 
tcgatttgtc
Secondary structure (Cloverleaf model)
>SRA1005234	Arg	TCG
                   t      ACTA tcgatttgtc
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     A T C C C     A
      C A A        A      | + | | |     G
    T       C T C G       T G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTT
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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