The detailed information of tRNA gene sequence


Sequence ID>SRA1005242
Genome IDSRR006907.129836
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 8
End posion on genome 81
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
nnngtatcaa
tRNA gene sequence 
GCCCAGATAGCTCAGTTGGTAGAGTAATGGACTGAAGATCCATGTGTCGCCAGTTCAAGT
CTGGCTCTGGGCACtt
Downstream region at tRNA end position 
tactatataa
Secondary structure (Cloverleaf model)
>SRA1005242	Phe	GAA
                   a      ACtt tactatataa
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     A - T          T G
                    T     C G G T C     A
      T G A        A      | | | | |     A
    T       C T C G       G C C A G     C
    G       | | | +                 T T
    G       G A G T
      T A          A     GTGTC
                    A - T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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