The detailed information of tRNA gene sequence


Sequence ID>SRA1005244
Genome IDSRR006907.130504
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 242
End posion on genome 315
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
aaaagttatg
tRNA gene sequence 
GCGGGCGTAGCCAAGTGGTAAGGCAATGGATTGTGACTCCATCACTCGCGGGTTCAAACC
CCGTCGTTCGCCCAa
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1005244	His	GTG
                   g      CCAa nnnnnnnnnn
                     G - C
                     C - G
                     G - C
                     G + T
                     G + T
                     C - G
                     G - C          C A
                    T     T G C C C     A
        G A        A      + | | | |     A
      T     A C C G       G C G G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     CACTC
                    A - T
                    T - A
                    G - C
                    G - C
                    A - T
                  T       C
                  T       A
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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