The detailed information of tRNA gene sequence


Sequence ID>SRA1005245
Genome IDSRR006907.130757
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 200
End posion on genome 124
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caatcattga
tRNA gene sequence 
CGCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTNAAGGTCACAGGTTCAAA
TCCTGTCCCCGCATCCA
Downstream region at tRNA end position 
atttccttta
Secondary structure (Cloverleaf model)
>SRA1005245	Met	CAT
                   a      TCCA atttccttta
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      C G A        G      | | | | |     A
    C       C G A G       A C A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C   N
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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