The detailed information of tRNA gene sequence


Sequence ID>W1810378435
Genome IDPXJC01000001
Search identical group
Phylum/ClassCoprothermobacterota
SpeciesCoprothermobacter proteolyticus BWF2A [PXJC]
Start position on genome 43290
End posion on genome 43382
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaaaatagtc
tRNA gene sequence 
GGAGAGGTGTCCGAGCGGCCGAAGGAACCCGACTGGAAATCGGGTAGGCGGCTAAACCCC
GCCTCGAGGGTTCAAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
acccggtacg
Secondary structure (Cloverleaf model)
>W1810378435	Ser	GGA
                   c      GCCA acccggtacg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     A
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      C G A        A     TAGGCGGCTAAACCCCGCCTC
                    C - G
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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