The detailed information of tRNA gene sequence


Sequence ID>SRA1005253
Genome IDSRR006907.134646
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 121
End posion on genome 197
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cgggtatcac
tRNA gene sequence 
CGGGATATAGCGCAGCTTGGTAGCGTTCCTGATTTGGGTTCAGGAGGTCGCAGGTTCGAA
TCCTGCTATCCCGATCA
Downstream region at tRNA end position 
atcagttaaa
Secondary structure (Cloverleaf model)
>SRA1005253	Pro	TGG
                   c      ATCA atcagttaaa
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T A
                    T     C G T C C     A
      C G A        A      | | | | |     G
    T       C G C G       G C A G G     C
    T       | | | +                 T T
    G       G C G T
      G T A        T     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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