The detailed information of tRNA gene sequence


Sequence ID>SRA1005265
Genome IDSRR006907.138688
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 151
End posion on genome 240
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccagtatcat
tRNA gene sequence 
GGAAGCGTGGCAGAGTCCGGTTTATTGCAACAGTCTTGAAAACTGTCGATCCGAAAGGGT
CCGTGAGTTCGAATCTCACCGCTTCCACCA
Downstream region at tRNA end position 
attagaggat
Secondary structure (Cloverleaf model)
>SRA1005265	Ser	TGA
                   t      ACCA attagaggat
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C A C T C     A
    C T G A        G      | | | | |     G
  C         G A C G       G T G A G     C
  G         + | | |                 T T
  G         T T G C
    T T T A        A     CGATCCGAAAGGGTCC
                    A - T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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