The detailed information of tRNA gene sequence


Sequence ID>SRA1005285
Genome IDSRR006907.152493
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 22
End posion on genome 97
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gtttcaatat
tRNA gene sequence 
GGGGGATTGGTGCTAATTGGGAACACATGTGCTTTGCAAGCATGAGTAAGCAGTTCGAAT
CTGCTATCCTCCACCA
Downstream region at tRNA end position 
aagttttaat
Secondary structure (Cloverleaf model)
>SRA1005285	Ala	TGC
                   t      ACCA aagttttaat
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     T C G T C     A
      A A T        G      | | | | |     G
    T       C G T G       A G C A G     C
    T         | | |                 T T
    G       A C A C
      G G A        A     AGTA
                    T + G
                    G + T
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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