The detailed information of tRNA gene sequence


Sequence ID>SRA1005287
Genome IDSRR006907.152714
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 193
End posion on genome 108
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
gaagattcaa
tRNA gene sequence 
ACCTCTTTGGCGGAATTGGTAAACGCAATTGATTTAGAATCAATCGTCATAATGACTTGA
GAGTTCGAATCTCTCAGGAGGTACTA
Downstream region at tRNA end position 
acaattaaaa
Secondary structure (Cloverleaf model)
>SRA1005287	Leu	TAG
                   a      ACTA acaattaaaa
                     A - T
                     C - G
                     C - G
                     T - A
                     C - G
                     T + G
                     T - A          T A
                    T     C T C T C     A
      T A A        G      | | | | |     G
    T       G G C G       G A G A G     C
    G         | | |                 T T
    G       A C G C
      T A A        A     CGTCATAATGACTT
                    A - T
                    T - A
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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