The detailed information of tRNA gene sequence


Sequence ID>SRA1005288
Genome IDSRR006907.152869
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 6
End posion on genome 82
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
nnnnnaatat
tRNA gene sequence 
TGTCTCGTAACTCAGTTGGTTAGAGTGCTATTCTGATACGATAGATGTCGTTGGTTCGAT
TCCAACCGAGACAACAA
Downstream region at tRNA end position 
aaataaaaaa
Secondary structure (Cloverleaf model)
>SRA1005288	Ile	GAT
                   t      ACAA aaataaaaaa
                     T - A
                     G - C
                     T - A
                     C - G
                     T - A
                     C - G
                     G - C          T T
                    T     C A A C C     A
      T G A        A      | | | | |     G
    T       C T C A       G T T G G     C
    G       | | | |                 T T
    G       G A G T
      T T A        G     ATGTC
                    C - G
                    T - A
                    A - T
                    T - A
                    T + G
                  C       C
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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