The detailed information of tRNA gene sequence


Sequence ID>SRA1005289
Genome IDSRR006907.154483
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 54
End posion on genome 143
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tatttctatt
tRNA gene sequence 
GGTGGTGTGTCTGAGTGGCCAAAGGTACACGCCTCGAAAGCGTGTGAAGGTAGAAATATC
TTCCGTGGGTTCAAATCCCACCGCCACCGCgt
Downstream region at tRNA end position 
tgtaaaaata
Secondary structure (Cloverleaf model)
>SRA1005289	Ser	CGA
                   t      GCgt tgtaaaaata
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     A
    G       G T C T       G T G G G     C
    G         + |                   T T
    C       A G G T
      C A A        A     TGAAGGTAGAAATATCTTCC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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