The detailed information of tRNA gene sequence


Sequence ID>SRA1005290
Genome IDSRR006907.154483
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 246
End posion on genome 159
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcttcaatgt
tRNA gene sequence 
GGAGGATTCGCCTAGTGGCCTATGGCGCTCGCTTGGAAAGCGGGTTGGGAGCAATCCCTC
AAGGGTTCAAATCCCTTATCCTCCGCCA
Downstream region at tRNA end position 
aattattttt
Secondary structure (Cloverleaf model)
>SRA1005290	Ser	GGA
                   t      GCCA aattattttt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     T T C C C     A
      T G A        C      | | | | |     A
    G       T C C G       A A G G G     C
    G         | | |                 T T
    C       T G G C
      C T A        G     TTGGGAGCAATCCCTC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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