The detailed information of tRNA gene sequence


Sequence ID>SRA1005292
Genome IDSRR006907.156346
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 251
End posion on genome 178
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tttccaaaca
tRNA gene sequence 
GGGGATATAGCTCAGATTGGTAGAGCGCGGTCTTTGCAAGGCTGATGTCAGGAGTTCGAG
TCTCCTTATCTCCAtaa
Downstream region at tRNA end position 
ataaaaataa
Secondary structure (Cloverleaf model)
>SRA1005292	Ala	TGC
                   a      Ataa ataaaaataa
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     T C C T C     A
      A G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     ATGTC
                    C - G
                    G + T
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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