The detailed information of tRNA gene sequence


Sequence ID>SRA1005293
Genome IDSRR006907.157571
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 107
End posion on genome 182
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
tcgcgaatgT
tRNA gene sequence 
GCCCTCGTAGCTCAGTTGGATAGAGCGCGGCTTTCCTAAAGCTGAGGTCGCAGGTTCGAG
CCCTGCCGGGGGTATtt
Downstream region at tRNA end position 
ttcattgccc
Secondary structure (Cloverleaf model)
>SRA1005293	Arg	CCT
                   T      ATtt ttcattgccc
                     G + T
                     C - G
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C          C G
                    T     C G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGTC
                    C - G
                    G + T
                    G - C
                    C - G
                    T - A
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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