The detailed information of tRNA gene sequence


Sequence ID>SRA1005297
Genome IDSRR006907.160736
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 154
End posion on genome 228
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agccatccat
tRNA gene sequence 
GGCAGAGTAGCTCAGGGGTAGAGCAGAGGACTCATAAGCCTTTGGTCGGGAGTTCAAATC
TCCCCTCTGCCACCA
Downstream region at tRNA end position 
atggatggga
Secondary structure (Cloverleaf model)
>SRA1005297	Met	CAT
                   t      ACCA atggatggga
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C C C T C     A
        G A        A      | | | | |     A
      G     C T C G       G G G A G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     TGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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