The detailed information of tRNA gene sequence


Sequence ID>SRA1005299
Genome IDSRR006907.162664
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 274
End posion on genome 199
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttttataaaa
tRNA gene sequence 
CTCCGTATGGTGTAATCTGGTAGCATGGTTGCTTTGGGAGCAAGCGGTCCAGGTTCAAAT
CCTGGTATGGAGACCA
Downstream region at tRNA end position 
acaaggaaaa
Secondary structure (Cloverleaf model)
>SRA1005299	Pro	TGG
                   a      ACCA acaaggaaaa
                     C - G
                     T - A
                     C - G
                     C - G
                     G + T
                     T - A
                     A - T          T A
                    T     G G T C C     A
      T A A        G      | | | | |     A
    C       T G T G       C C A G G     C
    T       + | | +                 T T
    G       G C A T
      G T A        G     CGGT
                    G   G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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