The detailed information of tRNA gene sequence


Sequence ID>SRA1005305
Genome IDSRR006907.165343
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 166
End posion on genome 239
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cactaattat
tRNA gene sequence 
AGCGGGTTAGAGTAGTGGTCACTCGAAGGTCTCATAAGCCTTACAGGTTGGTTCGATTCC
AGCACCCGCAACCA
Downstream region at tRNA end position 
tttttttaag
Secondary structure (Cloverleaf model)
>SRA1005305	Met	CAT
                   t      ACCA tttttttaag
                     A   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A          T T
                    T     C G A C C     A
        G A        A      | + | | |     G
      T     T G A G       G T T G G     C
      G     | | | |                 T T
      G     A C T C
        T C        G     ACAG
                    A - T
                    A - T
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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