The detailed information of tRNA gene sequence


Sequence ID>SRA1005306
Genome IDSRR006907.165902
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 135
End posion on genome 60
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
attaaaatat
tRNA gene sequence 
CTAGGTGTAGCTCAATAGGTAGAGCATCCGCTTTGGGAGCGGAAGGTTGTTGGTTCAAGT
CCAGCTACCTAGACCA
Downstream region at tRNA end position 
attcaaggag
Secondary structure (Cloverleaf model)
>SRA1005306	Pro	TGG
                   t      ACCA attcaaggag
                     C - G
                     T - A
                     A - T
                     G - C
                     G - C
                     T - A
                     G + T          T G
                    T     C G A C C     A
      T A A        A      | + | | |     A
    A       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTT
                    T - A
                    C - G
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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