The detailed information of tRNA gene sequence


Sequence ID>SRA1005308
Genome IDSRR006907.166940
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 82
End posion on genome 6
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttttatattt
tRNA gene sequence 
GGGCTCGTGGTGTAGAGGCCTAACATGCCTCCCTGTCACGGAGGAGATCGCCGGTTCGAA
TCCGGTCGGGCCCGCCA
Downstream region at tRNA end position 
agttgnnnnn
Secondary structure (Cloverleaf model)
>SRA1005308	Asp	GTC
                   t      GCCA agttgnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     T G G C C     A
      A G A        G      + | | | |     G
    G       T G T G       G C C G G     C
    G       | | | +                 T T
    C       A C A T
      C T A        G     AGATC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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