The detailed information of tRNA gene sequence


Sequence ID>SRA1005309
Genome IDSRR006907.167070
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 256
End posion on genome 173
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gttttcccac
tRNA gene sequence 
GGAGGGCTCGCATAGTGGCCTAGTGCACCGGTCTTGAAAACCGGCAAGGGAAACCTTCGT
GGGTTCAAATCCCACGCCCTCCGCnc
Downstream region at tRNA end position 
gttttatcac
Secondary structure (Cloverleaf model)
>SRA1005309	Ser	TGA
                   c      GCnc gttttatcac
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G          T A
                    T     C A C C C     A
      T G A        C      | | | | |     A
    G       T A C G       G T G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        A     CAAGGGAAACCTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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