The detailed information of tRNA gene sequence


Sequence ID>SRA1005310
Genome IDSRR006907.167408
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 181
End posion on genome 105
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aaaggggatt
tRNA gene sequence 
CGGGATGTAGCGCAGTCCGGTAGCGCACCTGCTTTGGGAGCAGGGGGTCCCAGGTTCGAA
TCCTGGTATCCCGACAA
Downstream region at tRNA end position 
aaataaaacg
Secondary structure (Cloverleaf model)
>SRA1005310	Pro	TGG
                   t      ACAA aaataaaacg
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G + T          T A
                    T     G G T C C     A
      T G A        A      | | | | |     G
    C       C G C G       C C A G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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