The detailed information of tRNA gene sequence


Sequence ID>SRA1005313
Genome IDSRR006907.170080
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 134
End posion on genome 64
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttgcagaaag
tRNA gene sequence 
AGCAGTATAGCTTAACGGTAGAGCAATGGTCTCATAATCCATGGGTGAGAGTTCAATTCT
CTCTTCTGCTAacc
Downstream region at tRNA end position 
ctaagcaata
Secondary structure (Cloverleaf model)
>SRA1005313	Met	CAT
                   g      Aacc ctaagcaata
                     A - T
                     G - C
                     C - G
                     A - T
                     G - C
                     T   T
                     A - T          T T
                    T     C T C T C     A
        A A        A      | | | | |     A
      C     T T C G       G A G A G     C
      G     + | | |                 T T
      G     G A G C
        T A        A     GGGT
                    A - T
                    T - A
                    G - C
                    G - C
                    T   T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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