The detailed information of tRNA gene sequence


Sequence ID>SRA1005315
Genome IDSRR006907.170483
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 180
End posion on genome 108
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tttatttact
tRNA gene sequence 
GCCCTAGTGGCTCAGCCGGTAGAGCGATACCTTGGTAAGGTATAGGCCGGGGGTTCGAAT
CCCCCCTAGGGCTtat
Downstream region at tRNA end position 
aaacattcct
Secondary structure (Cloverleaf model)
>SRA1005315	Thr	GGT
                   t      Ttat aaacattcct
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     A - T
                     G - C          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGCC
                    A - T
                    T - A
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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