The detailed information of tRNA gene sequence


Sequence ID>SRA1005318
Genome IDSRR006907.174803
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 137
End posion on genome 213
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
atgtcattaa
tRNA gene sequence 
GGGGACGTAGCTCAACTGGTTAGAGTACCGGACTGTCGATCCGGATGTTGCGGGTTCGAG
TCCCGTCGTCCTCGCTA
Downstream region at tRNA end position 
aggtttatct
Secondary structure (Cloverleaf model)
>SRA1005318	Asp	GTC
                   a      GCTA aggtttatct
                     G - C
                     G + T
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T G
                    T     T G C C C     A
      C A A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        A     ATGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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