The detailed information of tRNA gene sequence


Sequence ID>SRA1005319
Genome IDSRR006907.175990
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 253
End posion on genome 170
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
nnnnnnnttc
tRNA gene sequence 
GGGTCGGTGCCCGAGTGGTTAATGGGGCGGACTGTAAATCCGCTGGCTCTGCCTACGCTG
GTTCAAATCCAGCCCGGCCCACCT
Downstream region at tRNA end position 
tccacatgcc
Secondary structure (Cloverleaf model)
>SRA1005319	Tyr	GTA
                   c      ACCT tccacatgcc
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C
                     G - C          T A
                    T     C G A C C     A
      T G A        G      | | | | |     A
    G       G C C C       G C T G G     C
    G           | |                 T T
    T       A T G G
      T A          G     TGGCTCTGCCTAC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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