The detailed information of tRNA gene sequence


Sequence ID>SRA1005323
Genome IDSRR006907.177801
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 81
End posion on genome 9
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position
acccgccatt
tRNA gene sequence
GGCCCCATAGTTAAATGGATATAACAAGTGCCTTCTAAGCACTGATTAGAGGTTCGATTC
CTCTTGGGGCTACtt
Downstream region at tRNA end position
gacaacnnnn
Secondary structure (Cloverleaf model)
>SRA1005323	Arg	TCT
                   t      ACtt gacaacnnnn
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     T C T C C     A
      T A A        A      | | | | |     G
    G       A T T G       A G A G G     C
    G       | | | |                 T T
    A       T A A C
      T A          A     GATT
                    A - T
                    G - C
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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