The detailed information of tRNA gene sequence


Sequence ID>SRA1005328
Genome IDSRR006907.180472
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 108
End posion on genome 182
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
taatcaagac
tRNA gene sequence 
GCGCGATTAACTCAGCGGTAGAGTGCCTCGTTTACACCGAGGATGTCGGGAGTTCGACCC
TCTCATCGCGCACCA
Downstream region at tRNA end position 
aattatgagt
Secondary structure (Cloverleaf model)
>SRA1005328	Val	TAC
                   c      ACCA aattatgagt
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          C C
                    T     C T C T C     A
        G A        A      | + | | |     G
      C     C T C A       G G G A G     C
      G     | | | |                 T T
      G     G A G T
        T A        G     ATGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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