The detailed information of tRNA gene sequence


Sequence ID>SRA1005330
Genome IDSRR006907.181487
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 254
End posion on genome 179
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgactctcag
tRNA gene sequence 
GGCGGAGTAGCTCAGTCGGCTAGAGCAGAGGAATCATAATCCTTGTGTCGGGGTTCGAAT
CCCTCCTCCGCTACCA
Downstream region at tRNA end position 
gttttatcaa
Secondary structure (Cloverleaf model)
>SRA1005330	Met	CAT
                   g      ACCA gttttatcaa
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        A        + | | |     G
    C       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GTGT
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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