The detailed information of tRNA gene sequence


Sequence ID>SRA1005347
Genome IDSRR006907.192675
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 129
End posion on genome 215
Amino Acid Ser
Anticodon ACT
Upstream region at tRNA start position 
attctcgttT
tRNA gene sequence 
GGAGATTTGGCAGAGTGGTCTAATGCAGCGGTTTACTAAACCGCCGATGAGCAATCATCC
GGGGGTTCGAATCCCTCAGTCTCCGTtt
Downstream region at tRNA end position 
ctaatcgtaa
Secondary structure (Cloverleaf model)
>SRA1005347	Ser	ACT
                   T      GTtt ctaatcgtaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     T + G
                     T - A          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C T A        A     CGATGAGCAATCATCC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    A C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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