The detailed information of tRNA gene sequence


Sequence ID>SRA1005351
Genome IDSRR006907.197532
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 89
End posion on genome 161
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tataaataaa
tRNA gene sequence 
TGCAGTTTAGAGGAGTGGTTTACCTCGTGAGGCTCATGATCTCAAGGCGATAGTTCGAAT
CTATCAGCTGCACatg
Downstream region at tRNA end position 
tggctttagg
Secondary structure (Cloverleaf model)
>SRA1005351	Met	CAT
                   a      Catg tggctttagg
                     T - A
                     G - C
                     C - G
                     A - T
                     G - C
                     T + G
                     T - A          T A
                    T     C T A T C     A
      T G A        A      | | | | |     G
    G       G G A G       G A T A G     C
    G       | | | |                 T T
    T       C C T C
      T T A        G     AGGC
                    T - A
                    G - C
                    A - T
                    G - C
                    G + T
                  C       A
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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