The detailed information of tRNA gene sequence


Sequence ID>SRA1005371
Genome IDSRR006907.217436
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 32
End posion on genome 107
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ctccctataa
tRNA gene sequence 
GCCTCCTTAACTCAGTTGGTAGAGCCACTGATTTGTAATCAGTAGGTCGTTGGTTCGAGT
CCGACAGGAGGCTCAA
Downstream region at tRNA end position 
catannnnnn
Secondary structure (Cloverleaf model)
>SRA1005371	Thr	TGT
                   a      TCAA catannnnnn
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     C - G
                     T - A          T G
                    T     C A G C C     A
      T G A        A      | | + | |     G
    T       C T C A       G T T G G     C
    G       | | |                   T T
    G       G A G C
      T A          C     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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