The detailed information of tRNA gene sequence


Sequence ID>SRA1005379
Genome IDSRR006907.224529
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 259
End posion on genome 183
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
nnnnnnnncg
tRNA gene sequence 
GGGCGCGTAGCTCAGGCGGTCAGAGCGCGGCCCTGATAAGGCCGAGGCCCCTGGTTCGAG
TCCAGGCGCGCCCACCC
Downstream region at tRNA end position 
cggcggaaac
Secondary structure (Cloverleaf model)
>SRA1005379	Ile	GAT
                   g      ACCC cggcggaaac
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          T G
                    T     G G A C C     A
      G G A        A      | | | | |     G
    C       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        G     AGGCC
                    C - G
                    G - C
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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