The detailed information of tRNA gene sequence


Sequence ID>SRA1005387
Genome IDSRR006907.232721
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 90
End posion on genome 14
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
nnnnnnntaT
tRNA gene sequence 
CGGGGTGTAGCTCAGCCCGGCTAGAGCGCACGGTTCGGGACCGTGAGGTCGAAGGTTCAA
ATCCTTTCACCCCGATtc
Downstream region at tRNA end position 
atccccctac
Secondary structure (Cloverleaf model)
>SRA1005387	Pro	CGG
                   T      ATtc atccccctac
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T T T C C     A
    C C G A        A      + | | | |     A
  C         C T C G       G A A G G     C
  G         | | | |                 T T
  G         G A G C
    C T A          G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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