The detailed information of tRNA gene sequence


Sequence ID>SRA1005399
Genome IDSRR006907.245683
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 5
End posion on genome 78
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnctat
tRNA gene sequence 
GCTGGTTTAGCAATCTGGCGAATGCAATCGACTCATAATCGATCTAAGGTGGGTTCGATC
CCCTCAACCAGCACtt
Downstream region at tRNA end position 
gacattccag
Secondary structure (Cloverleaf model)
>SRA1005399	Met	CAT
                   t      ACtt gacattccag
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     T - A
                     T - A          C T
                    T     C T C C C     A
      T C T        A      |   | | |     G
    G       A A C G       G T G G G     C
    G         | | |                 T T
    C       A T G C
      G A          A     CTAAG
                    A - T
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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