The detailed information of tRNA gene sequence


Sequence ID>SRA1005400
Genome IDSRR006907.246068
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 157
End posion on genome 84
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gctgttattg
tRNA gene sequence 
GGGCCCATAGCTCAGTTGGTTAGAGCAGTCGGCTCATAACCGATAGGTCCCAGGTTCAAG
TCCTGGTGGGCCCAttc
Downstream region at tRNA end position 
agtggaatta
Secondary structure (Cloverleaf model)
>SRA1005400	Met	CAT
                   g      Attc agtggaatta
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     G G T C C     A
      T G A        A      | | | | |     A
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    G + T
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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