The detailed information of tRNA gene sequence


Sequence ID>SRA1005409
Genome IDSRR006907.255321
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 220
End posion on genome 145
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
tttatctcaA
tRNA gene sequence 
GCAAGAGTAGCTCAATTGGCAGAGCGTCAGGTTTCCATCCTGAATGTTGAGGGGTTCAAA
TCCCTTCTCTTGCTTta
Downstream region at tRNA end position 
gtgtgtggaa
Secondary structure (Cloverleaf model)
>SRA1005409	Gly	TCC
                   A      TTta gtgtgtggaa
                     G - C
                     C - G
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     T T C C C     A
      T A A        A      | + | | |     A
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     ATGTTG
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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