The detailed information of tRNA gene sequence


Sequence ID>SRA1005410
Genome IDSRR013437.8943
Search identical group
Phylum/ClassNoise and the accurate determination of microbial diversity from 454 pyrosequencing data (SRP000570)
Species
Start position on genome 124
End posion on genome 49
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
attgaagtac
tRNA gene sequence 
GCCGGTATGGCGCAACAGGGAGCGCTGCTGATTTGTAATCAGAGGGTTGCGGGTTCGACT
CCTGCTGCCGGCACCA
Downstream region at tRNA end position 
cactacaagg
Secondary structure (Cloverleaf model)
>SRA1005410	Thr	TGT
                   c      ACCA cactacaagg
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     T + G
                     A - T          T C
                    T     C G T C C     A
      C A A        G      | | + | |     G
    A       C G C G       G C G G G     C
    G       | | | |                 T T
    G       G C G C
      G A          T     GGGTT
                    G   A
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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