The detailed information of tRNA gene sequence


Sequence ID>SRA1005411
Genome IDSRR013515.14793
Search identical group
Phylum/ClassViral metagenome of the Antarctic Lake Limnopolar in spring and summer? (SRP000593)
Species
Start position on genome 230
End posion on genome 155
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
ttattactat
tRNA gene sequence 
GGGCATCTATCTCAACGGTTAGAGAACACAGCTTATATCTGTGACTATCTGAGTTCGACT
CTCAGGGTGCCTACCA
Downstream region at tRNA end position 
tataaagaaa
Secondary structure (Cloverleaf model)
>SRA1005411	Ile	TAT
                   t      ACCA tataaagaaa
                     G + T
                     G - C
                     G - C
                     C - G
                     A - T
                     T + G
                     C - G          T C
                    T     G A C T C     A
      C A A        A      | | | | |     G
    G       C T C T       C T G A G     C
    G       | | | |                 T T
    T       G A G A
      T A          A     ACTAT
                    C - G
                    A - T
                    C - G
                    A - T
                    G - C
                  C       T
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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