The detailed information of tRNA gene sequence


Sequence ID>SRA1005412
Genome IDSRR013516.18396
Search identical group
Phylum/ClassViral metagenome of the Antarctic Lake Limnopolar in spring and summer? (SRP000593)
Species
Start position on genome 208
End posion on genome 134
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
tgtatagatT
tRNA gene sequence 
GGAGTGTTCGTCCAGTTGGTTAAGACATCGGGCTTTGAACCCGAGAACGGGAGTTCAACT
CTCTCACACTCCATta
Downstream region at tRNA end position 
tcaagttcgg
Secondary structure (Cloverleaf model)
>SRA1005412	Gln	TTG
                   T      ATta tcaagttcgg
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     T - A          T C
                    T     C T C T C     A
      T G A        C      | + | | |     A
    T       C C T G       G G G A G     C
    G         | | |                 T T
    G       A G A C
      T T A        A     GAAC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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