The detailed information of tRNA gene sequence


Sequence ID>SRA1005420
Genome IDSRR013519.15112
Search identical group
Phylum/ClassViral metagenome of the Antarctic Lake Limnopolar in spring and summer? (SRP000593)
Species
Start position on genome 66
End posion on genome 141
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ttgaattaac
tRNA gene sequence 
GGCGCGTTCGTCTAGTGGTTAGGACTCTGGGTTTTCATCCCAGCAATCAGGGGTTCGAGT
CCCCTACGCGCTACCA
Downstream region at tRNA end position 
aagttgtttt
Secondary structure (Cloverleaf model)
>SRA1005420	Glu	TTC
                   c      ACCA aagttgtttt
                     G + T
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     T - A          T G
                    T     T C C C C     A
      T G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          T     CAATC
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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