The detailed information of tRNA gene sequence


Sequence ID>SRA1005421
Genome IDSRR013520.2473
Search identical group
Phylum/ClassViral metagenome of the Antarctic Lake Limnopolar in spring and summer? (SRP000593)
Species
Start position on genome 159
End posion on genome 248
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atattagata
tRNA gene sequence 
GGAAGGGTCGCATAGTGGCCTAGTGCGCCATCTTGGAAAGGTGGTATACCTGCAAGGGTA
TCGAGGGTTCAAATCCCTCTCCTTCCGCCA
Downstream region at tRNA end position 
attatttatt
Secondary structure (Cloverleaf model)
>SRA1005421	Ser	GGA
                   a      GCCA attatttatt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        C      | | | | |     A
    G       T A C G       G A G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TATACCTGCAAGGGTATC
                    C - G
                    C - G
                    A - T
                    T + G
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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