The detailed information of tRNA gene sequence


Sequence ID>SRA1005428
Genome IDSRR013521.2173
Search identical group
Phylum/ClassViral metagenome of the Antarctic Lake Limnopolar in spring and summer? (SRP000593)
Species
Start position on genome 252
End posion on genome 172
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
ncctagttaa
tRNA gene sequence 
GCGCGAATGTCCGAGTGGTTAAGGAGCTAGATTTAGGCTCTAGTGTCGAAAGGCTCGCAG
GTTCAAATCCTGCTTCGCGCAtct
Downstream region at tRNA end position 
ggttcgttag
Secondary structure (Cloverleaf model)
>SRA1005428	Leu	TAG
                   a      Atct ggttcgttag
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T          T A
                    T     C G T C C     A
      T G A        G      | | | | |     A
    G       G C C T       G C A G G     C
    G         | | |                 T T
    T       A G G A
      T A          G     TGTCGAAAGGCTC
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  T       C
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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